Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8175415 chr5:46193462 T/C LOC647121 chr1:121260910-121313686:+ 0.37 7.89 2.01E-14 Box Plot
THCA rs8175432 chr5:46046834 A/G LOC647121 chr1:121260910-121313686:+ 0.38 8.17 2.86E-15 Box Plot
THCA rs8176791 chr11:20959465 C/A ANKS6 chr9:101493611-101559247:- 0.34 5.93 5.74E-9 Box Plot
THCA rs8177 chr14:39819734 T/G LOC647288 chr13:75811890-75814517:- -0.42 -7.99 1.01E-14 Box Plot
THCA rs8180562 chr6:28141460 G/A BTN3A2 chr6:26365387-26378548:+ -0.55 -9.61 4.11E-20 Box Plot
THCA rs8180562 chr6:28141460 G/A ZFP57 chr6:29640169-29648887:- 0.58 6.87 1.97E-11 Box Plot
THCA rs8180907 chr8:3254573 T/C CSMD1 chr8:2792875-4852494:- -0.57 -11.53 2.72E-27 Box Plot
THCA rs8185016 chr5:46121806 T/C LOC647121 chr1:121260910-121313686:+ 0.38 8.14 3.49E-15 Box Plot
THCA rs8185055 chr5:46262251 A/C LOC647121 chr1:121260910-121313686:+ -0.37 -7.98 1.07E-14 Box Plot
THCA rs8185098 chr5:46125490 A/T LOC647121 chr1:121260910-121313686:+ 0.36 7.77 4.76E-14 Box Plot
THCA rs8185101 chr5:46183350 A/G LOC647121 chr1:121260910-121313686:+ 0.37 7.92 1.63E-14 Box Plot
THCA rs8185114 chr5:46181945 T/C LOC647121 chr1:121260910-121313686:+ 0.37 7.99 1.04E-14 Box Plot
THCA rs8185144 chr5:46090865 G/A LOC647121 chr1:121260910-121313686:+ -0.38 -8.16 3.0E-15 Box Plot
THCA rs8185178 chr5:46339544 C/T LOC647121 chr1:121260910-121313686:+ -0.37 -8 9.42E-15 Box Plot
THCA rs8185185 chr5:46214460 G/C LOC647121 chr1:121260910-121313686:+ 0.37 7.99 1.05E-14 Box Plot